Implementing electronic scales to support standardized phenotypic data collection - the case of the Scale for the Assessment and Rating of Ataxia (SARA)
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Título: | Implementing electronic scales to support standardized phenotypic data collection - the case of the Scale for the Assessment and Rating of Ataxia (SARA) |
Autor/a: | Maarouf, Haitham |
Dirección/Titoría: | Taboada Iglesias, María Jesús (dir.) Sobrido Gómez, María Jesús |
Centro/Departamento: | Universidade de Santiago de Compostela. Centro Internacional de Estudos de Doutoramento e Avanzados (CIEDUS) Universidade de Santiago de Compostela. Escola de Doutoramento Internacional en Ciencias e Tecnoloxía Universidade de Santiago de Compostela. Programa de Doutoramento en Investigación en Tecnoloxías da Información |
Palabras chave: | Rating scales | Human Phenotype Ontology | Clinical Archetypes | SARA | |
Data: | 2018 |
Resumo: | The main objective of this doctoral thesis was to facilitate the integration of the semantics required to automatically interpret collections of standardized clinical data. In order to address the objective, we combined the best performances from clinical archetypes, guidelines and ontologies for developing an electronic prototype for the Scale of the Assessment and Rating of Ataxia (SARA), broadly used in neurology. A scaled-down version of the Human Phenotype Ontology was automatically extracted and used as backbone to normalize the content of the SARA through clinical archetypes. The knowledge required to exploit reasoning on the SARA data was modeled as separate information-processing units interconnected via the defined archetypes. Based on this approach, we implemented a prototype named SARA Management System, to be used for both the assessment of cerebellar syndrome and the production of a clinical synopsis. For validation purposes, we used recorded SARA data from 28 anonymous subjects affected by SCA36. Our results reveal a substantial degree of agreement between the results achieved by the prototype and human experts, confirming that the combination of archetypes, ontologies and guidelines is a good solution to automate the extraction of relevant phenotypic knowledge from plain scores of rating scales. |
URI: | http://hdl.handle.net/10347/16636 |
Dereitos: | Esta obra atópase baixo unha licenza internacional Creative Commons BY-NC-ND 4.0. Calquera forma de reprodución, distribución, comunicación pública ou transformación desta obra non incluída na licenza Creative Commons BY-NC-ND 4.0 só pode ser realizada coa autorización expresa dos titulares, salvo excepción prevista pola lei. Pode acceder Vde. ao texto completo da licenza nesta ligazón: https://creativecommons.org/licenses/by-nc-nd/4.0/deed.gl |
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Esta obra atópase baixo unha licenza internacional Creative Commons BY-NC-ND 4.0. Calquera forma de reprodución, distribución, comunicación pública ou transformación desta obra non incluída na licenza Creative Commons BY-NC-ND 4.0 só pode ser realizada coa autorización expresa dos titulares, salvo excepción prevista pola lei. Pode acceder Vde. ao texto completo da licenza nesta ligazón: https://creativecommons.org/licenses/by-nc-nd/4.0/deed.gl
Esta obra atópase baixo unha licenza internacional Creative Commons BY-NC-ND 4.0. Calquera forma de reprodución, distribución, comunicación pública ou transformación desta obra non incluída na licenza Creative Commons BY-NC-ND 4.0 só pode ser realizada coa autorización expresa dos titulares, salvo excepción prevista pola lei. Pode acceder Vde. ao texto completo da licenza nesta ligazón: https://creativecommons.org/licenses/by-nc-nd/4.0/deed.gl